Load current BioQC signatures

Load current BioQC signatures

readCurrentSignatures(uniqGenes = TRUE, namespace = NULL)

Arguments

uniqGenes	Logical, whether duplicated genes should be removed, passed to readGmt.
namespace	Character, namespace of the gene-set, or codeNULL, passed to readGmt

Value

A GmtList

See also

readGmt

Examples

readCurrentSignatures()
#> A gene-set list in GMT format with 378 genesets
#> Gene-sets:
#>   Adipose_NR_0.7_3 (Roche,n=11): CD36,COL1A1,COMP,...
#>   Adipose_Subcutaneous_NR_0.7_3 (Roche,n=49): ADH1B,MYMX,TNFRSF8,...
#>   Adipose_Visceral_(Omentum)_NR_0.7_3 (Roche,n=41): ALOX15,MYMX,CFB,...
#>   ...
#>   uterus_Fantom5_Tissue_0.7_3 (Roche,n=45): LINC01541,BNC2,PAEP,...
#>   vagina_Fantom5_Tissue_0.7_3 (Roche,n=17): HBB,DHRS2,MICB,...
#>   vein_Fantom5_Tissue_0.7_3 (Roche,n=139): RAG1,DNTT,CD1B,...