David Discovers Drug Discovery
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medchem

edX Medicinal Chemistry - Chapter Six on Blood and Drug Transport

edX Medicinal Chemistry - Chapter Five on Receptors

edX Medicinal Chemistry - Chapter Four on enzymes

edX Medicinal Chemistry - Chapter Three on protein structures

edX Medicinal Chemistry - Chapter Two on the drug discovery process

edX Medicinal Chemistry - chapter one

edX

edX Medicinal Chemistry - Chapter Six on Blood and Drug Transport

edX Medicinal Chemistry - Chapter Five on Receptors

edX Medicinal Chemistry - Chapter Four on enzymes

edX Medicinal Chemistry - Chapter Three on protein structures

edX Medicinal Chemistry - Chapter Two on the drug discovery process

edX Medicinal Chemistry - chapter one

glmnet

Ridge regression, LASSO, and elastic net explained

ridge regression

Ridge regression, LASSO, and elastic net explained

LASSO

Ridge regression, LASSO, and elastic net explained

elastic net

Ridge regression, LASSO, and elastic net explained

pharmacology

Pharmacogenomics of GPCR Drug Targets

GPCR

Pharmacogenomics of GPCR Drug Targets

genetics

Pharmacogenomics of GPCR Drug Targets

pharmacogenomics

Pharmacogenomics of GPCR Drug Targets

database

Notes on using sqlite3

sqlite3

Notes on using sqlite3

R

Axis in Python and MARGIN in R explained

Linking native routines between R packages - a demo

Building R and/or R packages for Windows

Disable non-portable compiler flags with ~/.R/Makevars

Install R in Linux MINT 18

Develop R packages with Rcpp and RStudio

Rcpp

Develop R packages with Rcpp and RStudio

Rstudio

Develop R packages with Rcpp and RStudio

ZLSD

Zürich Life Science Day 2018: presentation and impressions

Roche

Talk at *Insight China*

Zürich Life Science Day 2018: presentation and impressions

career

Thoughts inspired by a recital of Igor Levit

On The Process of Becoming A Great Scientist

Zürich Life Science Day 2018: presentation and impressions

NLP

Course on Natural Language Processing with Deep Learning - Stanford CS224n

A crash course to start state-of-the-art NLP in 2018

NCBI

A crash course to start state-of-the-art NLP in 2018

word2vec

A crash course to start state-of-the-art NLP in 2018

LIME

A crash course to start state-of-the-art NLP in 2018

course

Course on Natural Language Processing with Deep Learning - Stanford CS224n

ML

Course on Natural Language Processing with Deep Learning - Stanford CS224n

Keras

Keras, a python deep learning library

linux

Install R in Linux MINT 18

CatBoost

Machine Learning with CatBoost

boosting

Machine Learning with CatBoost

science

Thoughts inspired by a recital of Igor Levit

On The Process of Becoming A Great Scientist

molecular phenotyping

Molecular Phenotyping in Drug Discovery

InsightChina

Talk at *Insight China*

Career

Talk at *Insight China*

China

Talk at *Insight China*

Talk

Talk at *Insight China*

C

Building R and/or R packages for Windows

Disable non-portable compiler flags with ~/.R/Makevars

Windows

Building R and/or R packages for Windows

RNAseq

Covariates and control variables explained

Filter BAM/SAM files by insert size

statistics

Covariates and control variables explained

covariates

Covariates and control variables explained

emotion

Staying mentally healthy during the coronavirus pandemic

inductive

Deep learning with graph networks

biases,

Deep learning with graph networks

deep

Deep learning with graph networks

learning,

Deep learning with graph networks

graph

Deep learning with graph networks

networks

Deep learning with graph networks

SARS-nCoV-2

Learning from mathematical models of infectious-disease dynamics

python

Axis in Python and MARGIN in R explained

pandas

Axis in Python and MARGIN in R explained

numpy

Axis in Python and MARGIN in R explained

nucleosome

Nucleosome positioning and its prediction

proteomics

Probing protein communities with mass spectrometry

review

Probing protein communities with mass spectrometry

genome-editing

RNA-guided endonuclease editing: history and testing in the clinic

RGEN

RNA-guided endonuclease editing: history and testing in the clinic

ELK

Learning Logstash - Part I

Logstash

Learning Logstash - Part I

ElasticSearch

Learning Logstash - Part I

Snakemake

Submitting Snakemake jobs to Slurm

Slurm

Submitting Snakemake jobs to Slurm

HPC

Submitting Snakemake jobs to Slurm

TCR

Analysing single-cell T-cell receptor sequencing data with Scirpy

sequencing

Analysing single-cell T-cell receptor sequencing data with Scirpy

r

Continuous documentation, testing, and integration for R packages

ribios

Continuous documentation, testing, and integration for R packages

piano

Thoughts inspired by a recital of Igor Levit

AMIDD

Applied Mathematics and Informatics In Drug Discovery (2020)

teaching

Applied Mathematics and Informatics In Drug Discovery (2020)

SPARK

A SPARK for therapeutic pathway hunting

CLI

Read and look up words from Linux command line

dict

Read and look up words from Linux command line

TTS

Read and look up words from Linux command line

microRNA

Micro RNA, Big Prize

Nobel

Micro RNA, Big Prize

target

Public talk about target and modality selection in drug discovery

modality

Public talk about target and modality selection in drug discovery

  • Jitao David Zhang
  • mail@jdzhang.me

Subscribe GPG Key

Notes of a computational biologist working in drug discovery